Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs1279319 chr14:33589558 T/C 1.85E-6 279 26.52 25.63 11.58 KM Plot
KIRP rs12801252 chr11:123652114 A/G 6.57E-5 286 25.53 28.03 15.7 KM Plot
KIRP rs12810390 chr12:96363032 G/C 6.3E-9 277 25.63 26.92 10.37 KM Plot
KIRP rs12908340 chr15:64427704 A/C 0.00011 287 18.03 24.22 28.03 KM Plot
KIRP rs12913304 chr15:60752897 G/A 3.66E-5 284 24.73 28.12 14.88 KM Plot
KIRP rs12916400 chr15:60786784 T/A 2.66E-5 285 25.5 28.05 14.88 KM Plot
KIRP rs12918773 chr16:89741403 G/A 2.51E-8 284 26.4 24.67 9.77 KM Plot
KIRP rs12920286 chr16:965798 C/T 0.000173 277 26.57 26.57 15.53 KM Plot
KIRP rs12922197 chr16:89744809 G/C 1.94E-8 288 26.4 24.15 9.77 KM Plot
KIRP rs12922295 chr16:8715243 A/G 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs12922711 chr16:89518942 T/C 0.000173 280 25.62 26.28 15.15 KM Plot
KIRP rs12924776 chr16:89586592 A/T 0.000178 289 25.58 26.37 18.22 KM Plot
KIRP rs12925888 chr16:977944 A/G 0.000117 284 26.63 25.97 14.83 KM Plot
KIRP rs12927041 chr16:1017060 G/A 2.62E-9 277 26.7 22.68 10.97 KM Plot
KIRP rs12930493 chr16:962946 A/G 0.000113 277 26.4 25.23 14.83 KM Plot